23013 Trs65
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23013 chr_6 Trs65 469632 472088 - Trs65

Synonyms

NCBI ID Ensembl Genomes exon ID
7451165 Thaps23013.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0214

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0177
 0.33

Most Highly Correlated Transcripts

5659

hypothetical protein
0.9189

bd392

(bd392) DEXDc
0.9151

3842

hypothetical protein
0.915

5902

hypothetical protein
0.9043

268650

(APB2) PTZ00429
0.903

7602

hypothetical protein
0.9028

10050

DUF2233
0.9017

9166

hypothetical protein
0.897

6062

hypothetical protein
0.8944

bd446

(bd446) HrpA
0.8856

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trs65 superfamily TRAPP trafficking subunit Trs65; This family is one of the subunits of the TRAPP Golgi trafficking... - 128.024 7.65E-33 414 - 719 superfamily 257260
Trs65 superfamily TRAPP trafficking subunit Trs65; This family is one of the subunits of the TRAPP Golgi trafficking... - 128.024 7.65E-33 414 - 719 superfamily 257260

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47182 PHATRDRAFT_47182 269345 319315 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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