27564 PLN02344
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27564 chr_3 PLN02344 1605174 1606413 + PLN02344

Synonyms

NCBI ID Ensembl Genomes exon ID
7451317 Thaps27564.1, Thaps27564.2, Thaps27564.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0073

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0112
 0.40

Most Highly Correlated Transcripts

bd211

(bd211) Maf_Ham1 superfamily
0.8299

37288

PLN02487
0.8294

bd1757

(bd1757) NA
0.8209

26191

asnC
0.8071

31265

(CAT1_1) Mito_carr
0.8014

24832

hypothetical protein
0.7964

268270

Patched
0.7847

1094

hypothetical protein
0.7824

39606

PRK05431
0.7819

269393

(SQDB1) PLN02572
0.7768

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02344 chorismate mutase - 413.236 9.00E-145 1 - 309 multi-dom 177978

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43277 PHATRDRAFT_43277 160102 319270 470315 Cre03.g155200.t1.1 AT3G29200.1 264157

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004106 GO:0009073 -

GO:0004106

chorismate mutase activity

Details: 
Catalysis of the reaction: chorismate = prephenate.
GO Category: 
MF

GO:0009073

aromatic amino acid family biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO Category: 
BP

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