31265 (CAT1_1) Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31265 chr_1 (CAT1_1) Mito_carr 3033999 3034968 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7447627 Thaps31265.2, Thaps31265.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0039

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0090
 0.39

Most Highly Correlated Transcripts

26191

asnC
0.906

21235

RpsA
0.8693

261633

(CTS2) cysS
0.8674

ThpsCp110

(rpl6) ribosomal protein L6
0.866

40597

RPE65 superfamily
0.8645

39606

PRK05431
0.8587

268398

PRK04173
0.8575

24832

hypothetical protein
0.8526

28865

AarF
0.8513

23462

hypothetical protein
0.8495

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 78.0599 1.75E-18 206 - 283 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 78.0599 1.75E-18 206 - 283 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 78.0599 1.75E-18 206 - 283 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 78.0599 1.75E-18 206 - 283 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 78.0599 1.75E-18 206 - 283 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 78.0599 1.75E-18 206 - 283 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12405 PHATRDRAFT_12405 Not available Not available Not available Cre06.g295400.t1.2 AT5G46800.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 GO:0005215 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

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