Organism : Methanococcus maripaludis S2 | Module List :
Regulation information for MMP0772(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for MMP0772
|Gene||Common Name||Description||Module membership|
|MMP0020||nickel responsive regulator||49, 123|
|MMP0123||purT||phosphoribosylglycinamide formyltransferase 2||50, 123|
|MMP0174||HD phosphohydrolase family protein||42, 131|
|MMP0188||diphthamide biosynthesis protein||42, 163|
|MMP0208||hypothetical protein MMP0208||26, 31, 42, 82|
|MMP0228||trm1||N(2),N(2)-dimethylguanosine tRNA methyltransferase||21, 42|
|MMP0361||hypothetical protein MMP0361||42, 45, 163|
|MMP0436||rimK||RimK domain-containing protein||6, 31, 42, 72, 82, 110|
|MMP0437||hypothetical protein MMP0437||6, 31, 42, 53, 82|
|MMP0473||hypothetical protein MMP0473||31, 42|
|MMP0495||hypothetical protein MMP0495||31, 42, 127, 155|
|MMP0522||hypothetical protein MMP0522||42, 85, 146, 153|
|MMP0523||ABC transporter ATP-binding protein||42, 85, 146, 153|
|MMP0565||hypothetical protein MMP0565||42, 85|
|MMP0624||hypothetical protein MMP0624||50, 123|
|MMP0628||TOBE domain-containing protein||108, 123, 156|
|MMP0653||bile acid:sodium symporter||42, 64|
|MMP0683||ftsY||signal recognition particle-docking protein FtsY||50, 123|
|MMP0756||hypothetical protein MMP0756||42, 166|
|MMP0763||hypothetical protein MMP0763||43, 123|
|MMP0766||resP||site-specific recombinase||6, 42, 53, 72, 127|
|MMP0772||hypothetical protein MMP0772||42, 123|
|MMP0775||hypothetical protein MMP0775||42, 146, 153, 163|
|MMP0777||hypothetical protein MMP0777||42, 62|
|MMP0796||sugar efflux transporter||36, 42, 53, 69|
|MMP0807||carboxymuconolactone decarboxylase-like protein||42, 85, 155|
|MMP0820||frcA||coenzyme F420-reducing hydrogenase subunit alpha||123, 131|
|MMP0825||hdrA||heterodisulfide reductase subunit A||45, 123|
|MMP0831||mtbA||methylcobalamin:coenzyme M methyltransferase||42, 82|
|MMP0834||mtbA||uroporphyrinogen decarboxylase||26, 36, 42, 72, 155|
|MMP0869||cytidine/deoxycytidylate deaminase||42, 155|
|MMP0892||GCN5-like N-acetyltransferase||42, 85|
|MMP0908||CBS domain-containing protein||45, 123|
|MMP1016||putative CBS domain-containing signal transduction protein||13, 123|
|MMP1020||hypothetical protein MMP1020||42, 45|
|MMP1067||succinate dehydrogenase/fumarate reductase iron-sulfur subunit||19, 123|
|MMP1134||type A flavoprotein||58, 123|
|MMP1154||hdrC1||heterosulfide reductase subunit C1||74, 84, 123|
|MMP1156||carboxymuconolactone decarboxylase||74, 84, 108, 123|
|MMP1158||hypothetical protein MMP1158||74, 84, 123|
|MMP1223||hypothetical protein MMP1223||19, 123|
|MMP1226||geranylgeranyl reductase||42, 64|
|MMP1229||FUN14 family protein||58, 123|
|MMP1251||putative CBS domain-containing signal transduction protein||123, 145|
|MMP1252||CBS domain-containing protein||123, 145|
|MMP1280||hypothetical protein MMP1280||42, 62|
|MMP1347||HMmB||histone B||31, 123|
|MMP1389||hypothetical protein MMP1389||42, 163|
|MMP1439||cofactor-independent phosphoglycerate mutase||58, 123|
|MMP1476||hypothetical protein MMP1476||42, 45|
|MMP1533||hypothetical protein MMP1533||13, 123|
|MMP1534||hypothetical protein MMP1534||13, 123|
|MMP1536||hypothetical protein MMP1536||36, 42, 53, 161|
|MMP1596||hypothetical protein MMP1596||31, 42, 155|
|MMP1620||hypothetical protein MMP1620||42, 53|
|MMP1642||ATP/GTP-binding motif-containing protein||9, 123|
|MMP1655||hypothetical protein MMP1655||36, 42, 163|
|MMP1660||hypothetical protein MMP1660||42, 108, 123, 131|
|MMP1661||hypothetical protein MMP1661||123, 131|
|MMP1664||hypothetical protein MMP1664||42, 146|
|MMP1678||nfo||endonuclease IV||42, 72, 82|
|MMP1685||hypothetical protein MMP1685||123, 131|
|MMP1697||hdrA||heterodisulfide reductase subunit A||113, 114, 123|
|RNA_34||tRNA-Met4||Met tRNA||42, 100|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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Identity of gene members in a module may help to identify potential interactions between different functional modules. Therefore, neighbor genes that share the same module(s) with gene under consideration are shown here. For each memebr, gene name, description and modules that contain it are listed.
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