New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	900803 =	42 (0.180)	24 (0.100)	18/194	25.0	0.35	intergenic (‑132/‑155)	ldh/ftsW	L‑lactate dehydrogenase/cell division protein FtsW
	?	NC_014034	= 2995638	48 (0.200)					intergenic (+178/+42)	RCAP_rcc02802/RCAP_rcc02803	membrane dipeptidase/hypothetical protein
Rejected: Position hash score below cutoff.

CTTGGCGCCGACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGG..................................  <  NC_014034/900905‑900803 ....................................................................................................GGGGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGC  <  NC_014034/2995638‑2995605                                                                                                                                              GGCGCCGACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGG                                   <  2:2273475/101‑1 (MQ=1)      CGCCGACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGC                                 <  2:2786332/101‑1 (MQ=11)       GCCGACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCT                                <  2:971226/101‑1 (MQ=31)       GCCGACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCT                                <  1:834326/101‑1 (MQ=31)         CGACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCC                              >  2:728473/1‑101 (MQ=33)         CGACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCC                              <  1:956352/101‑1 (MQ=33)          GACTCTAGCCCAAGTTGCCCCATCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGCCGACCCGCGGGGGCatcc                             >  1:2648196/1‑97 (MQ=2)          GACTCTACCCCAAGCTGCCCCCTCTGACCAGAGTTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCG                             <  2:4567954/101‑1 (MQ=255)           ACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCGC                            <  2:653115/101‑1 (MQ=34)            CTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCGCC                           <  1:2130837/101‑1 (MQ=34)             TCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCGCCC                          <  2:1120710/101‑1 (MQ=34)                  CCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCGCCCCCgca                     <  1:734100/101‑4 (MQ=25)                   CCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCGCCCCCgcac                    <  2:1267494/101‑5 (MQ=25)                   CCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCGCCCCCgcac                    <  1:2542954/101‑5 (MQ=25)                    CAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCG.CCCCCGCACC                  <  2:3983019/101‑1 (MQ=21)                       GTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCG.CCCCCGCACCCCC               <  1:334001/101‑1 (MQ=21)                       GTTGCCCCCTCGGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCGGGGGCGACCCGCGGGGGCTCCG.CCCCCGCACCCCC               <  2:3025973/101‑1 (MQ=255)                         TGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGGTCCG.CCCCCGCACCCCCCG             >  2:4101417/1‑101 (MQ=12)                           CCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGGTCCG.GCCCCGCACCCCCCGGC           >  2:1023047/1‑101 (MQ=9)                             CCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCG.CCCCCGCACCCCCGGGCGT         <  1:744106/101‑1 (MQ=255)                               CTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCG.CCCCCGCACCCCCGGGCGTAT       >  2:1509957/1‑101 (MQ=255)                               CTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCG.CCCCCGCACCCCCGGGCGTAT       <  2:2712419/101‑1 (MQ=255)                                TCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCG.CCCCCGCACCCACGGGCGTATT      <  1:1332265/101‑1 (MQ=255)                                    ACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGGGGCTCCG.CCCCCGCACCCCCGGGCGTATTTgca  >  1:3830194/1‑98 (MQ=255)                                                                                                                                           CTTGGCGCCGACTCTAGCCCAAGTTGCCCCCTCTGACCAGAGCTTTTGCCGGGCCGCGGCGCGCGGGGGCTTTCGCCCCGGCAGGGCCGGGGCGACCCGCGGG..................................  <  NC_014034/900905‑900803 ....................................................................................................GGGGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGC  <  NC_014034/2995638‑2995605 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 21 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG