New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 744791	21 (0.130)	3 (0.020)	2/138	31.5	0.17	intergenic (+176/+36)	idi2/bchO	isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
	?	NC_014034	= 1965238	8 (0.030)					intergenic (+6/+86)	bdhA/RCAP_rcc01818	3‑hydroxybutyrate dehydrogenase/hypothetical protein
Rejected: Position hash score below cutoff.

GACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGATCAGAT  >  NC_014034/744707‑744891                                                                                     |                                                                                                     gaCTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCGCgg                                                                                      >  1:638994/1‑101 (MQ=255)                                                               gggggTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATcc                        >  2:2910262/1‑101 (MQ=255)                                                                ggggTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGGGGCGAAATCTCACCCCCCGAGCCAGTCCAGAATCATCCCTGAAAGCCCCTCcg                       >  1:715468/1‑101 (MQ=255)                                                                 gggTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCcgc                      >  2:2811602/1‑101 (MQ=255)                                                                  ggTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCcgcg                     >  2:4137451/1‑101 (MQ=255)                                                                    tGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGGGGCGAAATCTCACCCCCCGAGCCAGTCCAGAATCATCCCTGAAAGCCCACCCCCGGc                   >  1:1365804/1‑101 (MQ=37)                                                                     gCGGGGGGCGGAGCCCCCCGCGGGGCGCCTCCGGCCTGCCCGAGGGGAAATCTCACCCCTCGAGCCAGTCCAGAAACAACCCTGAAAACCCAACCCCGGCa                  >  1:974053/1‑101 (MQ=37)                                                                       ggggggCGGAGCCCCCCGCGGGTCGCCTCGGGGCTGCCCGAGGCGAAATCTCACCCCTCGAGGCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCaag                >  2:437861/1‑100 (MQ=255)                                                                       ggggggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAAc                >  1:1207341/1‑101 (MQ=255)                                                                        gggggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGCGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGGAAcc               >  1:2968015/1‑101 (MQ=255)                                                                        gggggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCCTCCCCGGCAAcc               >  1:2014458/1‑101 (MQ=255)                                                                         ggggCGGCGCCCCCCGCGGGTCGCCCCGGGCCTGCCCGAGGCGAAATCTCACCCCTCCAGCCAGCCCCGAATCACCCCTCAAAAACCATCCCCCGCAAccc              >  2:964907/1‑100 (MQ=21)                                                                         ggggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGGGAAATCCCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATACGCGGCaagcc              >  2:328785/1‑98 (MQ=37)                                                                         ggggCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCCCCAGCCAGTCCAGAAACATCCCTGAAAACCCATCCGCGGCAAccc              >  1:243935/1‑100 (MQ=37)                                                                           ggCGGAGCCCCCCGAGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCg            >  2:3660781/1‑101 (MQ=255)                                                                             cGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTg          >  2:2927495/1‑101 (MQ=255)                                                                             cGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTg          >  2:2953496/1‑101 (MQ=255)                                                                              ggAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTgg         >  1:1353090/1‑101 (MQ=255)                                                                                 gCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGATc      >  2:3505937/1‑101 (MQ=255)                                                                                 gCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGATc      >  2:3817740/1‑101 (MQ=255)                                                                                  ccccccGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGCAAGCCCATCCGCGGCAACCTCGTGGATCa     >  1:3092049/1‑101 (MQ=255)                                                                                     cccGCGGGTCGCCTTGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGATCAGAt  >  1:4093676/1‑101 (MQ=255)                                                                                     |                                                                                                     GACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCCTGCCCGAGGCGAAATCTCACCCCTCGAGCCAGTCCAGAATCATCCCTGAAAGCCCATCCGCGGCAACCTCGTGGATCAGAT  >  NC_014034/744707‑744891 Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 17 ≤  ATCG  < 27 ≤  ATCG  < 37 ≤  ATCG