New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 392494	72 (0.420)	10 (0.060)	9/150	24.1	0.21	intergenic (‑142/+1)	RCAP_rcc00363/trmD	hypothetical protein/tRNA (guanine‑N1)‑methyltransferase
	?	NC_014034	= 1699935	5 (0.020)					intergenic (+8/+35)	RCAP_rcc01568/purF	RES domain family protein/amidophosphoribosyltransferase
Rejected: Position hash score below cutoff.

TCCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAA...................................................................................................  >  NC_014034/392446‑392494 ........................TCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAGCGAAACAGCACCAGATGCCAGCGCTCG  <  NC_014034/1699935‑1699837                                                                                                                                                      ctCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGCAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCG                                                 <  2:1780047/99‑1 (MQ=1)   CGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAG                                               <  2:2159443/101‑1 (MQ=1)    GGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGA                                              <  1:576898/101‑1 (MQ=1)              CCCCGGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTC                                    <  1:3675731/101‑1 (MQ=1)               CCCGGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCC                                   <  2:2663589/101‑1 (MQ=1)                 cgGGCGGGGCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCT                                 <  2:4333289/99‑1 (MQ=1)                    GCGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCA                              <  2:1997626/101‑1 (MQ=1)                     CGGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCCCCcg                             >  1:656376/1‑99 (MQ=1)                      GGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCCGC                            >  1:3256440/1‑101 (MQ=1)                      GGGTCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCCGC                            >  2:2646898/1‑101 (MQ=1)                                                                                                                                                      TCCGGGGGCGGAGCCCCCGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAA...................................................................................................  >  NC_014034/392446‑392494 ........................TCGCCTCGGCGCAGCCGAGGCGAAACTCTTCCCTCAACCGAAATCCGCAGGCTGGCGATGGCCGGTCAGTTGCGCCGAGATCGGCGGCTCCCTCCAGCGAAACAGCACCAGATGCCAGCGCTCG  <  NC_014034/1699935‑1699837 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG