Regulatory Modules
Displaying 71 - 80 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0001 |
3100 |
11000 |
0.41 | DVU0383, DVU0824, DVU0964, DVU1243, DVU1790, DVU1962, DVU2120, DVU2139, DVU2169, DVU2326, DVU2602, DVU2622, DVU2915 | glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process |
| bicluster_0125 |
21 |
4.9 |
0.41 | DVU0310, DVU0311, DVU0312, DVU0313, DVU0314, DVU0315, DVU0512, DVU0513, DVU0515, DVU0516, DVU0517, DVU0519, DVU0913, DVU2232, DVU3003, DVU3018, DVU3019, DVU3020, DVU3004 | organelle organization, cell projection assembly, bacterial-type flagellum assembly, organelle assembly, cell projection organization |
| bicluster_0200 |
0.037 |
3 |
0.41 | DVU2457, DVUA0040, DVUA0045, DVUA0048, DVUA0055, DVUA0057, DVUA0058, DVUA0059, DVUA0060, DVUA0062, DVUA0063, DVU0086, DVU2458, DVU3105, DVUA0047, DVUA0141, DVUA0146 | polysaccharide biosynthetic process, polysaccharide metabolic process, cellular polysaccharide biosynthetic pro..., cellular carbohydrate biosynthetic proce..., cellular polysaccharide metabolic proces... |
| bicluster_0234 |
0.48 |
31 |
0.41 | DVU0351, DVU1035, DVU1239, DVU1508, DVU1858, DVU2283, DVU2336, DVU2628, DVU2874, DVU3110, DVU3325, DVUA0043, DVUA0096, DVUA0139, DVUA0140, DVU0070, DVU2456, DVU2517, DVU2755, DVU3211, DVUA0055 | carbohydrate binding, serine-type peptidase activity, serine hydrolase activity |
| bicluster_0204 |
4100 |
13000 |
0.41 | DVU0189, DVU0197, DVU0202, DVU0203, DVU0206, DVU0209, DVU0210, DVU0211, DVU0212, DVU2857, DVU2858, DVU2859, DVU2861, DVU2862, DVU2863, DVU2864, DVU2866, DVU2867 | |
| bicluster_0324 |
0.32 |
88 |
0.41 | DVU0484, DVU0539, DVU1233, DVU1562, DVU1563, DVU2598, DVU2600, DVU2623, DVU2624, DVU2702, DVU2703, DVU2721, DVU2722, DVU2723, DVU2729 | DNA metabolic process, [protein-PII] uridylyltransferase activi..., uridylyltransferase activity, nucleotidyltransferase activity |
| bicluster_0074 |
0.016 |
150 |
0.41 | DVU0692, DVU0693, DVU0694, DVU0774, DVU0775, DVU0776, DVU0777, DVU0779, DVU0780, DVU0845, DVU0846, DVU0847, DVU0848, DVU0849, DVU0850, DVU0851, DVU0917, DVU0918, DVU0919, DVU1264, DVU1294, DVU1296, DVU1932, DVU1295, DVU1636 | transmembrane transport, purine nucleoside biosynthetic process, purine ribonucleoside biosynthetic proce..., purine nucleoside metabolic process, purine ribonucleoside metabolic process |
| bicluster_0246 |
0.0085 |
4.9 |
0.41 | DVU0475, DVU1479, DVU0252, DVU0472, DVU0473, DVU0553, DVU0630, DVU0670, DVU1646, DVU1706, DVU1750, DVU1995, DVU2114, DVU2392, DVU2717, DVU2725, DVU2726 | regulation of transcription, DNA-templat..., regulation of biosynthetic process, regulation of gene expression, regulation of macromolecule biosynthetic..., regulation of nucleobase-containing comp... |
| bicluster_0190 |
0.00000064 |
1.7 |
0.42 | DVU0371, DVU0554, DVU0555, DVU0556, DVU0558, DVU0559, DVU0560, DVU0561, DVU0562, DVU1147, DVU1152, DVU1166, DVU1167, DVU1947, DVU1948, DVU2010, DVU2175, DVU1692, DVU2174, DVU2177 | DNA integration, carbohydrate metabolic process, oxidoreductase activity, acting on the a... |
| bicluster_0288 |
0.86 |
4.1 |
0.42 | DVU0165, DVU0166, DVU0167, DVU0168, DVU0384, DVU0390, DVU1089, DVU1260, DVUA0069, DVUA0070, DVU0386, DVU0387, DVU0388, DVU1038, DVU1351, DVUA0074, DVUA0076 | integral component of membrane, intrinsic component of membrane, membrane part, intramolecular oxidoreductase activity, intramolecular oxidoreductase activity, ... |
