Organism : Bacillus cereus ATCC14579 | Module List :
Regulation information for BC3475(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BC3475
|Gene||Common Name||Description||Module membership|
|BC0034||BC0034||CsfB protein (NCBI ptt file)||217, 351|
|BC0047||BC0047||Sporulation-specific protease YabG (NCBI ptt file)||217, 393|
|BC0288||BC0288||Ribosomal-protein-alanine acetyltransferase (NCBI ptt file)||217, 351|
|BC0480||BC0480||hypothetical protein (NCBI ptt file)||217, 241|
|BC0742||BC0742||Transcriptional activator tenA (NCBI ptt file)||3, 32|
|BC0743||BC0743||Hydroxymethylpyrimidine transport ATP-binding protein (NCBI ptt file)||3, 301|
|BC0744||BC0744||Hydroxymethylpyrimidine transport system permease protein (NCBI ptt file)||3, 32|
|BC0745||BC0745||Hydroxymethylpyrimidine-binding protein (NCBI ptt file)||3, 38|
|BC0746||BC0746||Regulatory protein TENI (NCBI ptt file)||3, 202|
|BC0747||BC0747||Glycine oxidase (NCBI ptt file)||3, 32|
|BC0748||BC0748||ThiS protein (NCBI ptt file)||3, 32|
|BC0749||BC0749||Thiazole biosynthesis protein thiG (NCBI ptt file)||3, 32|
|BC0750||BC0750||Molybdopterin biosynthesis MoeB protein (NCBI ptt file)||3, 32|
|BC0751||BC0751||Phosphomethylpyrimidine kinase (NCBI ptt file)||3, 32|
|BC0818||BC0818||Oligopeptide transport system permease protein oppB (NCBI ptt file)||217, 351|
|BC0819||BC0819||Oligopeptide transport system permease protein oppC (NCBI ptt file)||162, 217|
|BC0870||BC0870||Multidrug resistance ABC transporter ATP-binding and permease protein (NCBI ptt file)||104, 217|
|BC0871||BC0871||Multidrug resistance ABC transporter ATP-binding and permease protein (NCBI ptt file)||104, 217|
|BC0905||BC0905||Proline racemase (NCBI ptt file)||3, 436|
|BC0906||BC0906||Ornithine cyclodeaminase (NCBI ptt file)||3, 436|
|BC1141||BC1141||Spore germination protein PE (NCBI ptt file)||217, 351|
|BC1152||BC1152||Asparagine synthetase (NCBI ptt file)||136, 217|
|BC1243||BC1243||hypothetical protein (NCBI ptt file)||217, 377|
|BC1331||BC1331||Internalin (NCBI ptt file)||217, 419|
|BC1405||BC1405||ATP phosphoribosyltransferase (NCBI ptt file)||3, 32|
|BC1406||BC1406||Histidinol dehydrogenase (NCBI ptt file)||3, 32|
|BC1408||BC1408||Amidotransferase hisH (NCBI ptt file)||3, 32|
|BC1409||BC1409||Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (NCBI ptt file)||3, 32|
|BC1411||BC1411||Phosphoribosyl-AMP cyclohydrolase (NCBI ptt file)||3, 32|
|BC1412||BC1412||Phosphoribosyl-ATP pyrophosphatase (NCBI ptt file)||3, 32|
|BC1449||BC1449||cAMP-dependent protein kinase regulatory chain (NCBI ptt file)||217, 504|
|BC1568||BC1568||Methionine aminopeptidase (NCBI ptt file)||217, 407|
|BC1830||BC1830||Copper resistance protein A (NCBI ptt file)||123, 217|
|BC2378||BC2378||Transporter, LysE family (NCBI ptt file)||217, 509|
|BC2404||BC2404||hypothetical Cytosolic Protein (NCBI ptt file)||217, 241|
|BC2417||BC2417||hypothetical protein (NCBI ptt file)||123, 217|
|BC2430||BC2430||Methyltransferase (NCBI ptt file)||217, 453|
|BC2465||BC2465||hypothetical protein (NCBI ptt file)||85, 217|
|BC2544||BC2544||ABC transporter permease protein (NCBI ptt file)||217, 351|
|BC2545||BC2545||hypothetical protein (NCBI ptt file)||136, 217|
|BC2711||BC2711||Bacitracin resistance protein (Putative undecaprenol kinase) (NCBI ptt file)||2, 217|
|BC2741||BC2741||Transporter, Drug/Metabolite Exporter family (NCBI ptt file)||76, 217|
|BC2744||BC2744||hypothetical protein (NCBI ptt file)||158, 217|
|BC3167||BC3167||Xanthine dehydrogenase FAD-binding subunit (NCBI ptt file)||3, 347|
|BC3168||BC3168||Xanthine dehydrogenase molybdopterin-binding subunit (NCBI ptt file)||3, 347|
|BC3280||BC3280||hypothetical protein (NCBI ptt file)||136, 217|
|BC3474||BC3474||hypothetical protein (NCBI ptt file)||217, 351|
|BC3475||BC3475||hypothetical protein (NCBI ptt file)||3, 217|
|BC3593||BC3593||Transcriptional regulator, DeoR family (NCBI ptt file)||217, 351|
|BC3667||BC3667||ABC transporter permease protein (NCBI ptt file)||2, 217|
|BC3967||BC3967||hypothetical protein (NCBI ptt file)||154, 217|
|BC4304||BC4304||hypothetical Cytosolic Protein (NCBI ptt file)||217, 272|
|BC4520||uvrC||excinuclease ABC subunit C (RefSeq)||217, 351|
|BC4607||BC4607||hypothetical protein (NCBI ptt file)||217, 339|
|BC4641||BC4641||hypothetical protein (NCBI ptt file)||154, 217|
|BC4847||BC4847||D-alanyl-D-alanine carboxypeptidase (NCBI ptt file)||217, 361|
|BC4858||BC4858||DnaK suppressor protein (NCBI ptt file)||217, 241|
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If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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