Organism : Clostridium acetobutylicum | Module List :
Regulation information for CAC0722(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for CAC0722
|Gene||Common Name||Description||Module membership|
|CAC0079||CAC0079||Hypothetical protein (NCBI ptt file)||219, 309|
|CAC0263||serB||Phosphoserine phosphatase related protein (NCBI ptt file)||4, 218|
|CAC0309||CAC0309||Cell wall-associated hydrolase (NCBI ptt file)||4, 86|
|CAC0312||CAC0312||Hypothetical protein (NCBI ptt file)||4, 172|
|CAC0313||CAC0313||Phage shock protein A (NCBI ptt file)||4, 172|
|CAC0347||CAC0347||Hypothetical protein (NCBI ptt file)||309, 344|
|CAC0351||CAC0351||Hypothetical protein (NCBI ptt file)||89, 309|
|CAC0538||CAC0538||Beta-mannanase ManB-like enzyme, contains ChW-repeats (NCBI ptt file)||4, 205|
|CAC0607||CAC0607||Aspartyl aminopeptidase (NCBI ptt file)||287, 309|
|CAC0697||CAC0697||Galactose mutarotase related enzyme (NCBI ptt file)||4, 170|
|CAC0722||CAC0722||Predicted membrane protein; CF-9 family (NCBI ptt file)||4, 309|
|CAC0723||CAC0723||Transcriptional regulator, AcrR family (NCBI ptt file)||157, 309|
|CAC0724||CAC0724||Transcriptional regulator, AcrR family (NCBI ptt file)||132, 309|
|CAC0725||CAC0725||Predicted membrane protein; CF-9 family (NCBI ptt file)||132, 309|
|CAC0755||CAC0755||Multimeric flavodoxin WrbA family protein, diverged or disrupted (NCBI ptt file)||89, 309|
|CAC0756||CAC0756||Multimeric flavodoxin WrbA (NCBI ptt file)||157, 309|
|CAC1011||CAC1011||Uncharacterized small membrane protein, homolog of ykvA B.subtilis (NCBI ptt file)||282, 309|
|CAC1048||CAC1048||Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily (NCBI ptt file)||4, 253|
|CAC1139||CAC1139||Phage related protein, YonO B.subtilis homolog (NCBI ptt file)||4, 16|
|CAC1165||CAC1165||Hypothetical protein (NCBI ptt file)||4, 104|
|CAC1184||CAC1184||Hypothetical protein (NCBI ptt file)||4, 16|
|CAC1186||CAC1186||Hypothetical protein (NCBI ptt file)||89, 309|
|CAC1215||CAC1215||Hypothetical protein (NCBI ptt file)||4, 176|
|CAC1319||glpF||Glycerol uptake facilitator protein, GLPF (NCBI ptt file)||4, 133|
|CAC1320||glpP||Glycerol-3-phosphate responsive antiterminator (mRNA-binding), GLPP (NCBI ptt file)||4, 86|
|CAC1464||CAC1464||UVRA-like protein, probably involved in MDR transport (NCBI ptt file)||4, 166|
|CAC1606||CAC1606||Uncharacterized conserved protein (NCBI ptt file)||4, 73|
|CAC1607||CAC1607||Hypothetical protein (NCBI ptt file)||4, 137|
|CAC1827||CAC1827||TldD-like protein fragment (NCBI ptt file)||74, 309|
|CAC2050||CAC2050||Predicted membrane protein (NCBI ptt file)||4, 110|
|CAC2257||CAC2257||Hypothetical protein (NCBI ptt file)||4, 69|
|CAC2322||CAC2322||Hypothetical protein (NCBI ptt file)||4, 351|
|CAC2504||CAC2504||Hypothetical protein (NCBI ptt file)||4, 53|
|CAC2664||CAC2664||Predicted phosphoesterase, YSNB B.subtilis ortholog (NCBI ptt file)||302, 309|
|CAC2689||CAC2689||Uncharacterized protein, YJCM B.subtilis ortholog (NCBI ptt file)||4, 216|
|CAC2765||CAC2765||Similar to uncharacterized domain of sensory transducer protein (NCBI ptt file)||176, 309|
|CAC2949||CAC2949||Predicted permease (NCBI ptt file)||207, 309|
|CAC2992||CAC2992||Predicted short-chain dehydrogenase (NCBI ptt file)||4, 132|
|CAC3024||CAC3024||acyl-CoA thioesterase family protein (NCBI ptt file)||216, 309|
|CAC3025||CAC3025||Conserved membrane protein, possible permease, YHCI B.subtilis ortholog (NCBI ptt file)||157, 309|
|CAC3087||CAC3087||Phosphoenolpyruvate-protein kinase (PTS system enzyme I) (NCBI ptt file)||4, 255|
|CAC3264||CAC3264||Uncharacterized conserved protein, YTFJ B.subtilis ortholog (NCBI ptt file)||4, 341|
|CAC3280||CAC3280||Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats (NCBI ptt file)||4, 86|
|CAC3341||CAC3341||Multimeric flavodoxin WrbA family protein (NCBI ptt file)||4, 341|
|CAC3346||CAC3346||MDR-type permease (NCBI ptt file)||4, 150|
|CAC3363||CAC3363||Hypothetical protein (NCBI ptt file)||89, 309|
|CAC3430||CAC3430||Membrane associated, signal transduction histidine kinase-like ATPase (NCBI ptt file)||4, 353|
|CAC3438||CAC3438||Transcriptional regulator, (BlaI/MecI subfamily) (NCBI ptt file)||89, 309|
|CAC3487||CAC3487||Predicted transcriptional regulator (NCBI ptt file)||132, 309|
|CAC3548||CAC3548||Uncharacterized conserved Zn-finger containing protein (NCBI ptt file)||4, 244|
|CAC3597||CAC3597||Rubrerythrin (NCBI ptt file)||4, 57|
|CAC3598||CAC3598||Rubrerythrin (NCBI ptt file)||4, 57|
|CAC3599||CAC3599||Hypothetical protein (NCBI ptt file)||4, 206|
|CAC3623||CAC3623||Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) (NCBI ptt file)||4, 30|
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If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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