Cre02.g103850.t1.2 HISTIDINE BIOSYNTHESIS 5B

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g103850.t1.2 chromosome_2 HISTIDINE BIOSYNTHESIS 5B CDS 4955843 4957484 + 1 641

Phytozome

Locus Genomic View Functional Annotation
Cre02.g103850.t1.2 Cre02.g103850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HIS3 g2124.t1, Cre02.g103850.t1.1 JGI186880 30785250 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0040
motif_0040_1

motif_0040_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000073
Motif Bicluster: 
bicluster_0040
Width: 
24
Number of Sites: 
1
Consensus: 
aCaGcaaCAgcaGCAgcgGCAGca
motif_0040_2

motif_0040_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.77
Motif Bicluster: 
bicluster_0040
Width: 
23
Number of Sites: 
1
Consensus: 
GTTTgCTGaTGCgCATTcCtCAt
 0.25
bicluster_0084
motif_0084_1

motif_0084_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.033
Motif Bicluster: 
bicluster_0084
Width: 
14
Number of Sites: 
1
Consensus: 
TaaTTGTtaTTgTT
motif_0084_2

motif_0084_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
79
Motif Bicluster: 
bicluster_0084
Width: 
15
Number of Sites: 
1
Consensus: 
GCAgCGgCAGCagcA
 0.15

GO Terms

GO:0004424 GO:0000105 -

imidazoleglycerol-phosphate dehydratase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H(2)O.

histidine biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI186880

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