Cre03.g188700.t1.2 Plastid-lipid associated protein PAP / fibrillin family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g188700.t1.2 chromosome_3 Plastid-lipid associated protein PAP / fibrillin family protein CDS 5776710 5779326 - 2 616

Phytozome

Locus Genomic View Functional Annotation
Cre03.g188700.t1.2 Cre03.g188700.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
PLP6 g3908.t1, Cre03.g188700.t1.1 JGI145445 30787522 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0099
motif_0099_1

motif_0099_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.026
Motif Bicluster: 
bicluster_0099
Width: 
21
Number of Sites: 
1
Consensus: 
tGGtGgTGGCgGnGGCgGtGG
motif_0099_2

motif_0099_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
14
Motif Bicluster: 
bicluster_0099
Width: 
15
Number of Sites: 
1
Consensus: 
atacTaTacTTTtTT
 0.15
bicluster_0172
motif_0172_1

motif_0172_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.3
Motif Bicluster: 
bicluster_0172
Width: 
15
Number of Sites: 
1
Consensus: 
AgGAAAGaagnAAaa
motif_0172_2

motif_0172_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
94000
Motif Bicluster: 
bicluster_0172
Width: 
21
Number of Sites: 
1
Consensus: 
tctGTAaTAcAtCTagGanaA
 0.14

GO Terms

GO:0005198 GO:0009507 -

structural molecule activity

GO Category: 
molecular_function
Details: 
The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell.

chloroplast

GO Category: 
cellular_component
Details: 
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI145445

Add comment

Log in to post comments