Cre06.g267600.t2.1 Lycopene beta/epsilon cyclase protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g267600.t2.1 chromosome_6 Lycopene beta/epsilon cyclase protein CDS 2357352 2363755 + 6 403

Phytozome

Locus Genomic View Functional Annotation
Cre06.g267600.t2.1 Cre06.g267600.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
LCYE, LEC1 g6005.t2 JGI187094 30779399 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0099
motif_0099_1

motif_0099_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.026
Motif Bicluster: 
bicluster_0099
Width: 
21
Number of Sites: 
1
Consensus: 
tGGtGgTGGCgGnGGCgGtGG
motif_0099_2

motif_0099_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
14
Motif Bicluster: 
bicluster_0099
Width: 
15
Number of Sites: 
1
Consensus: 
atacTaTacTTTtTT
 0.15
bicluster_0172
motif_0172_1

motif_0172_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.3
Motif Bicluster: 
bicluster_0172
Width: 
15
Number of Sites: 
1
Consensus: 
AgGAAAGaagnAAaa
motif_0172_2

motif_0172_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
94000
Motif Bicluster: 
bicluster_0172
Width: 
21
Number of Sites: 
1
Consensus: 
tctGTAaTAcAtCTagGanaA
 0.14

GO Terms

GO:0016705 GO:0016117 -

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

carotenoid biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI187094

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