Cre10.g453500.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g453500.t1.2 chromosome_10 CDS 4694568 4700659 + 6 091

Phytozome

Locus Genomic View Functional Annotation
Cre10.g453500.t1.2 Cre10.g453500.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g11133.t1, Cre10.g453500.t1.1 Not available 30790508 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0117
motif_0117_1

motif_0117_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00015
Motif Bicluster: 
bicluster_0117
Width: 
15
Number of Sites: 
1
Consensus: 
CtCCaCCAcCtCCaC
motif_0117_2

motif_0117_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.2
Motif Bicluster: 
bicluster_0117
Width: 
24
Number of Sites: 
1
Consensus: 
TGTGTGTtAagnAtCAntagnAaA
 0.14
bicluster_0209
motif_0209_1

motif_0209_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.0053
Motif Bicluster: 
bicluster_0209
Width: 
15
Number of Sites: 
1
Consensus: 
CGCCaCCAcCtCcAC
motif_0209_2

motif_0209_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.66
Motif Bicluster: 
bicluster_0209
Width: 
21
Number of Sites: 
1
Consensus: 
AaTAcATTCAtGatTacaTAA
 0.16

GO Terms

-

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

Interaction Target Module Weight
down-regulates bicluster_0013 0.07
down-regulates bicluster_0045 0.06
up-regulates bicluster_0082 0.06
down-regulates bicluster_0099 0.06
up-regulates bicluster_0130 0.07
up-regulates bicluster_0148 0.07

String Network

Link to STRING STRING Network

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