Cre12.g505200.t1.2 DEA(D/H)-box RNA helicase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g505200.t1.2 chromosome_12 DEA(D/H)-box RNA helicase family protein CDS 2582887 2587462 - 4 575

Phytozome

Locus Genomic View Functional Annotation
Cre12.g505200.t1.2 Cre12.g505200.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HEL51 g12463.t1, Cre12.g505200.t1.1 JGI424586 30792990 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0068
motif_0068_1

motif_0068_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.4
Motif Bicluster: 
bicluster_0068
Width: 
21
Number of Sites: 
1
Consensus: 
CGCTgCTGCcGCtGCtGCTGc
motif_0068_2

motif_0068_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3500
Motif Bicluster: 
bicluster_0068
Width: 
24
Number of Sites: 
1
Consensus: 
TtttagtanAgtTcnCnAtAATtA
 0.13
bicluster_0108
motif_0108_1

motif_0108_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000068
Motif Bicluster: 
bicluster_0108
Width: 
23
Number of Sites: 
1
Consensus: 
CTGCtGCcgcTGCTgCTGCtgCa
motif_0108_2

motif_0108_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.02
Motif Bicluster: 
bicluster_0108
Width: 
15
Number of Sites: 
1
Consensus: 
GCCAgCacCAGCAGC
 0.12

GO Terms

GO:0003676 GO:0005524 GO:0008026 GO:0004386 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATP-dependent helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.

helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI424586

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