Cre16.g651750.t1.2 tRNA synthetase class I (I, L, M and V) family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g651750.t1.2 chromosome_16 tRNA synthetase class I (I, L, M and V) family protein CDS 1324258 1336081 + 11 823

Phytozome

Locus Genomic View Functional Annotation
Cre16.g651750.t1.2 Cre16.g651750.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
TSI g15764.t1, Cre16.g651750.t1.1 JGI381198 30777803 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0036
motif_0036_1

motif_0036_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000085
Motif Bicluster: 
bicluster_0036
Width: 
15
Number of Sites: 
1
Consensus: 
CTgCTgctgCTGcTG
motif_0036_2

motif_0036_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000057
Motif Bicluster: 
bicluster_0036
Width: 
21
Number of Sites: 
1
Consensus: 
cgCGCCcCcGCctCCGCcgcC
 0.21
bicluster_0105
motif_0105_1

motif_0105_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000014
Motif Bicluster: 
bicluster_0105
Width: 
21
Number of Sites: 
1
Consensus: 
CagCaGcAGCTGcTGgTGCaG
motif_0105_2

motif_0105_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
82
Motif Bicluster: 
bicluster_0105
Width: 
21
Number of Sites: 
1
Consensus: 
TcTtcatcatcacCTtcangT
 0.21

GO Terms

GO:0000166 GO:0004812 GO:0005524 GO:0006418 -

nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

aminoacyl-tRNA ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

tRNA aminoacylation for protein translation

GO Category: 
biological_process
Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI381198

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