PHATRDRAFT_10310 dna-directed rna polymerase i subunit (Zn-ribbon_RPA12)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_10310	chr_3	dna-directed rna polymerase i subunit (Zn-ribbon_RPA12)	1323940	1324197	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0200

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0154	0.20	20000 42000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Zn-ribbon_RPA12		C-terminal zinc ribbon domain of RPA12 subunit of RNA polymerase I; The C-terminal zinc ribbon...	cl02609	89.5696	4.80E-25	39 - 84	specific	259792
Zn-ribbon superfamily		C-terminal zinc ribbon domain of RNA polymerase intrinsic transcript cleavage subunit; The...	-	89.5696	4.80E-25	39 - 84	superfamily	261369

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
39698		Not available	262875	202037	64437	Cre01.g018000.t1.1	AT3G25940.1	487107

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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