PHATRDRAFT_13233 diguanylate cyclase with gaf sensor
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13233	chr_11	diguanylate cyclase with gaf sensor	412620	412964	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0405

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0088	0.33	0.011 18000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FhlA		FOG: GAF domain [Signal transduction mechanisms]	cl17456	43.4266	1.42E-06	5 - 115	specific	225113
GAF superfamily		GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl...	-	43.4266	1.42E-06	5 - 115	superfamily	266697

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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