Phatr_hclust_0405 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0006098 | pentose-phosphate shunt | 0.00444005 | 1 | Phatr_hclust_0405 |
| GO:0007165 | signal transduction | 0.0344292 | 1 | Phatr_hclust_0405 |
| GO:0006355 | regulation of transcription, DNA-dependent | 0.15368 | 1 | Phatr_hclust_0405 |
|
PHATRDRAFT_46768 : epsk domain protein (Branch superfamily) |
PHATRDRAFT_11318 : 3-hydroxyisobutyrate dehydrogenase (MmsB) |
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PHATRDRAFT_13233 : diguanylate cyclase with gaf sensor |
PHATRDRAFT_45206 : hsf-type dna-binding domain containing protein (HSF_DNA-bind) |
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PHATRDRAFT_34966 : tubulin tyrosine ligase-likememberisoform cra_c (TTL superfamily) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -0.454 | 0.0497619 |
| Copper_SH | Copper_SH | -0.666 | 0.000515464 |
| Green_vs_Red_24h | Green_vs_Red_24h | -1.636 | 0.00178571 |
| Silver_SH | Silver_SH | -0.638 | 0.000555556 |
| Cadmium_1.2mg | Cadmium_1.2mg | 0.090 | 0.364159 |
| BlueLight_24h | BlueLight_24h | 0.075 | 0.802443 |
| GreenLight_0.5h | GreenLight_0.5h | 1.360 | 0.00204918 |
| RedLight_6h | RedLight_6h | 2.574 | 0.000694444 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | 0.564 | 0.000961538 |
| light_6hr | light_6hr | -2.344 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -2.450 | 0.00060241 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | 0.064 | 0.677333 |
| Ammonia_SH | Ammonia_SH | -0.681 | 0.0496269 |
| Simazine_SH | Simazine_SH | -0.512 | 0.00231788 |
| Oil_SH | Oil_SH | -0.083 | 0.488765 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -1.302 | 0.000609756 |
| Cadmium_SH | Cadmium_SH | -0.698 | 0.000666667 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | -2.125 | 0.00166667 |
| highlight_0to6h | highlight_0to6h | -0.210 | 0.18262 |
| BlueLight_0.5h | BlueLight_0.5h | 1.802 | 0.000869565 |
| Dispersant_SH | Dispersant_SH | -0.814 | 0.000909091 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -1.857 | 0.000943396 |
| light_15.5hr | light_15.5hr | -3.633 | 0.000625 |
| light_10.5hr | light_10.5hr | -3.400 | 0.000561798 |
| Dispersed_oil_SH | Dispersed_oil_SH | -0.424 | 0.0117424 |
| Si_free | Si_free | 0.047 | 0.739286 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | 2.020 | 0.000396825 |
| Mixture_SH | Mixture_SH | -1.150 | 0.00181818 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | -2.817 | 0.0016129 |
| light_16hr_dark_30min | light_16hr_dark_30min | -3.265 | 0.000735294 |
| BlueLight_6h | BlueLight_6h | -0.243 | 0.23835 |
| highlight_12to48h | highlight_12to48h | -0.489 | 0.0289474 |
| RedLight_24h | RedLight_24h | 2.200 | 0.000943396 |
| Dark_treated | Dark_treated | 2.460 | 0.000446429 |
| GreenLight_6h | GreenLight_6h | -0.308 | 0.160816 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.135 | 0.0160714 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | -0.489 | 0.00135135 |
| RedLight_0.5h | RedLight_0.5h | 3.317 | 0.000555556 |
| Green_vs_Red_6h | Green_vs_Red_6h | -2.882 | 0.0015625 |
| Re-illuminated_24h | Re-illuminated_24h | 0.268 | 0.0803828 |
