PHATRDRAFT_13309 rexo4_ustma rna exonuclease 4 (REX4_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13309	chr_11	rexo4_ustma rna exonuclease 4 (REX4_like)	596340	596888	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0202

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0118	0.28	140 210

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
REX4_like		DEDDh 3'-5' exonuclease domain of RNA exonuclease 4, XPMC2, Interferon Stimulated...	cl10012	220.08	2.59E-73	4 - 161	specific	99847
DnaQ_like_exo superfamily		DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like...	-	220.08	2.59E-73	4 - 161	superfamily	263941

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
17654		Not available	198715	198625	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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