PHATRDRAFT_14068 chromosome 9 open reading frame 114 (Methyltrn_RNA_3)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_14068	chr_13	chromosome 9 open reading frame 114 (Methyltrn_RNA_3)	486300	487388	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0201

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0226	0.15	45 9200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltrn_RNA_3		Putative RNA methyltransferase; This family has a TIM barrel-like fold with a deep C-terminal...	cl12077	283.078	7.51E-94	14 - 320	specific	251405
Methyltrn_RNA_3 superfamily		Putative RNA methyltransferase; This family has a TIM barrel-like fold with a deep C-terminal...	-	283.078	7.51E-94	14 - 320	superfamily	264538

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
34021		Not available	201513	256290	310898	Cre16.g670617.t1.1	AT5G19300.1	551704

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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