PHATRDRAFT_16052 glycoside hydrolase family 28 protein polygalacturonasefamily protein (Pectate_lyase_3 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16052	chr_23	glycoside hydrolase family 28 protein polygalacturonasefamily protein (Pectate_lyase_3 superfamily)	141165	141977	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0360

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0134	0.25	0.0000011 0.000029

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Pectate_lyase_3 superfamily		Pectate lyase superfamily protein; This family of proteins possesses a beta helical structure like...	-	61.2301	3.66E-11	1 - 191	superfamily	267541

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	233370	265222	Not available	Cre12.g556350.t1.1	AT3G57790.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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