PHATRDRAFT_16798 synaptobrevin 8-1 (Synaptobrevin)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16798	chr_28	synaptobrevin 8-1 (Synaptobrevin)	98866	99339	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0186

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0078	0.34	48000 29000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Synaptobrevin superfamily		Synaptobrevin; Synaptobrevin.	-	67.5644	1.99E-15	66 - 133	superfamily	250253
Synaptobrevin superfamily		Synaptobrevin; Synaptobrevin.	-	67.5644	1.99E-15	66 - 133	superfamily	250253
Longin superfamily		Regulated-SNARE-like domain; Longin is one of the approximately 26 components required for...	-	42.5466	1.73E-06	1 - 47	superfamily	258059

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263742		Not available	267682	181579	Not available	Not available	Not available	348837

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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