PHATRDRAFT_16814 bop1-prov protein (BOP1NT)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_16814 chr_28 bop1-prov protein (BOP1NT) 326410 328398 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0201

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0255
 0.14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BOP1NT BOP1NT (NUC169) domain; This N terminal domain is found in BOP1-like WD40 proteins. cl19763 298.853 6.13E-96 1 - 280 specific 214986
BOP1NT superfamily BOP1NT (NUC169) domain; This N terminal domain is found in BOP1-like WD40 proteins. - 298.853 6.13E-96 1 - 280 superfamily 268116
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 102.413 4.73E-24 299 - 656 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 83.2143 4.62E-17 298 - 659 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
38776 Not available 181536 183181 212568 Cre10.g417950.t1.2 AT2G40360.1 248457

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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