PHATRDRAFT_17198 isoleucyl-trna synthetase (PLN02843)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_17198 chr_1 isoleucyl-trna synthetase (PLN02843) 167906 171355 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0147

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0256
 0.28

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IleRS_core catalytic core domain of isoleucyl-tRNA synthetases; Isoleucine amino-acyl tRNA synthetases (IleRS... cl00015 297.606 1.51E-91 477 - 715 specific 173909
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 217.87 4.33E-63 108 - 247 superfamily 260139
Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases; This... cl12020 249.749 1.57E-76 715 - 897 specific 153414
Anticodon_Ia_like superfamily Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This domain is... - 249.749 1.57E-76 715 - 897 superfamily 264512
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 217.87 4.33E-63 108 - 247 superfamily 260139
PLN02843 isoleucyl-tRNA synthetase - 1758.13 0 74 - 1040 multi-dom 215452

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
26726 Not available 276205 184346 65960 Cre16.g689871.t1.1 AT5G49030.2 511967

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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