PHATRDRAFT_18877 trna-ia37 modification enzyme (PRK14333)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_18877 chr_4 trna-ia37 modification enzyme (PRK14333) 251901 253359 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0049
 0.33

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Radical_SAM superfamily Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and... - 57.7285 4.74E-10 162 - 363 superfamily 100105
Radical_SAM superfamily Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and... - 57.7285 4.74E-10 162 - 363 superfamily 100105
UPF0004 superfamily Uncharacterized protein family UPF0004; This family is the N terminal half of the Prosite family.... - 124.536 2.01E-34 14 - 117 superfamily 250224
UPF0004 superfamily Uncharacterized protein family UPF0004; This family is the N terminal half of the Prosite family.... - 124.536 2.01E-34 14 - 117 superfamily 250224
TRAM superfamily TRAM domain; This small domain has no known function. However it may perform a nucleic acid binding... - 37.2101 0.000969527 388 - 450 superfamily 242412
PRK14333 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional - 683.316 0 14 - 451 multi-dom 237677

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42821 Not available 183336 319725 308277 Cre11.g467633.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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