PHATRDRAFT_19835 (dna directed) polypeptide h (RPB7)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_19835	chr_6	(dna directed) polypeptide h (RPB7)	954096	955049	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0005

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0249	0.32	29000 800000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNAP_Rpb7_N_like superfamily		RNAP_Rpb7_N_like: This conserved domain represents the N-terminal ribonucleoprotein (RNP) domain of...	-	88.8047	5.37E-23	2 - 82	superfamily	262095
RNA_pol_Rbc25 superfamily		RNA polymerase III subunit Rpc25; Rpc25 is a strongly conserved subunit of RNA polymerase III and...	-	86.6202	9.30E-22	80 - 187	superfamily	254712
RPB7		DNA-directed RNA polymerase, subunit E' [Transcription]	-	98.52	1.40E-25	1 - 188	multi-dom	224020

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263350		Not available	142959	23096	Not available	Cre12.g538400.t1.2	AT1G06790.1	538886

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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