PHATRDRAFT_20124 small gtp-binding protein (Obg_CgtA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_20124 chr_7 small gtp-binding protein (Obg_CgtA) 891304 892785 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0062

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0180
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Obg Obg GTPase; The Obg nucleotide binding protein subfamily has been implicated in stress response,... cl17170 219.989 7.10E-70 256 - 397 specific 206685
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 219.989 7.10E-70 256 - 397 superfamily 266525
GTP1_OBG superfamily GTP1/OBG; The N-terminal domain of B. subtilis GTPase obgE has the OBG fold, which is formed by... - 100.476 1.95E-25 93 - 254 superfamily 110047
Obg_CgtA Obg family GTPase CgtA; This model describes a univeral, mostly one-gene-per-genome GTP-binding... - 335.938 9.60E-113 93 - 400 multi-dom 233986

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 188730 154065 68600 Not available AT1G07615.1 470774

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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