PHATRDRAFT_21228 trna phosphotransferase 1 (PTS_2-RNA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_21228	chr_12	trna phosphotransferase 1 (PTS_2-RNA)	43665	44414	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0376

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0183	0.27	2.9 4.4

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PTS_2-RNA		RNA 2'-phosphotransferase, Tpt1 / KptA family; Tpt1 catalyses the last step of tRNA...	cl19470	182.357	1.32E-57	8 - 190	specific	250941
PTS_2-RNA superfamily		RNA 2'-phosphotransferase, Tpt1 / KptA family; Tpt1 catalyses the last step of tRNA...	-	182.357	1.32E-57	8 - 190	superfamily	267823

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22854		Not available	142575	296640	461661	Cre03.g193250.t1.2	AT2G45330.2	516787

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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