PHATRDRAFT_21682 tyw1_oryswybutosine-synthesizing protein 1 homolog (PRK13762)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_21682 chr_13 tyw1_oryswybutosine-synthesizing protein 1 homolog (PRK13762) 759950 761197 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0215

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0075
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Radical_SAM superfamily Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and... - 49.6394 2.17E-07 83 - 282 superfamily 100105
Radical_SAM superfamily Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and... - 49.6394 2.17E-07 83 - 282 superfamily 100105
Wyosine_form superfamily Wyosine base formation; Some proteins in this family appear to be important in wyosine base... - 63.7745 4.94E-13 265 - 340 superfamily 254917
Wyosine_form superfamily Wyosine base formation; Some proteins in this family appear to be important in wyosine base... - 63.7745 4.94E-13 265 - 340 superfamily 254917
PRK13762 tRNA-modifying enzyme; Provisional - 324.148 5.03E-108 22 - 348 multi-dom 237493

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
13378 Not available 202359 241377 426304 Cre14.g623300.t1.2 AT1G75200.1 260361

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments