PHATRDRAFT_21922 gtp-binding protein era (era)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_21922 chr_15 gtp-binding protein era (era) 83136 84155 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0141

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0138
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Era E. coli Ras-like protein (Era) is a multifunctional GTPase; Era (E. coli Ras-like protein) is a... cl17170 141.445 6.62E-41 2 - 160 specific 206726
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 141.445 6.62E-41 2 - 160 superfamily 266525
KH_2 KH domain; KH domain. cl00098 51.0015 1.23E-08 217 - 290 specific 254331
KH-II superfamily KH-II (K homology RNA-binding domain, type II). KH binds single-stranded RNA or DNA. It is found... - 51.0015 1.23E-08 217 - 290 superfamily 260189
era GTPase Era; Reviewed - 302.352 1.16E-101 2 - 301 multi-dom 234624

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
43076 Not available 190835 295431 422943 Cre02.g141706.t1.1 AT5G66470.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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