PHATRDRAFT_228 calcium atpase serca-like (ATPase-IIA1_Ca)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_228 chr_18 calcium atpase serca-like (ATPase-IIA1_Ca) 340302 343634 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0062

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0048
 0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 198.562 1.23E-57 84 - 335 superfamily 249606
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 198.562 1.23E-57 84 - 335 superfamily 249606
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 170.875 2.05E-48 808 - 1017 superfamily 250058
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 170.875 2.05E-48 808 - 1017 superfamily 250058
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 93.062 4.16E-22 414 - 535 superfamily 257602
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 93.062 4.16E-22 414 - 535 superfamily 257602
Cation_ATPase_N Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... cl02930 69.4894 3.24E-14 1 - 51 specific 250059
Cation_ATPase_N superfamily Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 69.4894 3.24E-14 1 - 51 superfamily 261517
COG4087 superfamily Soluble P-type ATPase [General function prediction only] - 42.546 8.92E-05 626 - 741 superfamily 226572
COG4087 superfamily Soluble P-type ATPase [General function prediction only] - 42.546 8.92E-05 626 - 741 superfamily 226572

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268458 Not available 200822 187628 429791 Cre05.g242350.t1.2 AT1G10130.1 564911

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments