PHATRDRAFT_23281 nrs er (nucleotide-rhamnose synthase epimerase-reductase) (PLN02778)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_23281	chr_22	nrs er (nucleotide-rhamnose synthase epimerase-reductase) (PLN02778)	473731	474987	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0097

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0168	0.27	11 80000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN02778		3,5-epimerase/4-reductase	cl09931	556.688	0	1 - 292	specific	178377
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	556.688	0	1 - 292	superfamily	263925
RfbD		dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]	-	68.4718	1.56E-13	4 - 261	multi-dom	224016

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
40788		Not available	199348	246208	Not available	Cre09.g387171.t2.1	AT1G63000.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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