PHATRDRAFT_23557 cation-efflux transporter (CzcD)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_23557	chr_25	cation-efflux transporter (CzcD)	116940	118127	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0124

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0077	0.23	31000 43000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CzcD		Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	cl00316	199.461	2.13E-60	32 - 379	specific	224151
Cation_efflux superfamily		Cation efflux family; Members of this family are integral membrane proteins, that are found to...	-	199.461	2.13E-60	32 - 379	superfamily	260348

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26530		Not available	185721	260498	468178	Cre03.g145087.t1.1	AT3G58810.2	517016

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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