PHATRDRAFT_25133 nog2_klula nucleolar gtp-binding protein 2 (NGP_1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_25133 chr_2 nog2_klula nucleolar gtp-binding protein 2 (NGP_1) 14544 16370 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0201

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0237
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NGP_1 A novel nucleolar GTP-binding protein, circularly permuted subfamily of the Ras GTPases;... cl17249 321.555 1.97E-107 230 - 386 specific 206751
YlqF_related_GTPase superfamily Circularly permuted YlqF-related GTPases; These proteins are found in bacteria, eukaryotes, and... - 321.555 1.97E-107 230 - 386 superfamily 247803
NGP1NT superfamily NGP1NT (NUC091) domain; This N terminal domain is found in a subfamily of hypothetical nucleolar... - 158.223 9.49E-46 55 - 192 superfamily 254634
NGP1NT superfamily NGP1NT (NUC091) domain; This N terminal domain is found in a subfamily of hypothetical nucleolar... - 158.223 9.49E-46 55 - 192 superfamily 254634
COG1161 Predicted GTPases [General function prediction only] - 201.842 2.24E-59 221 - 514 multi-dom 224083

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34729 Not available 214636 290110 51731 Cre07.g340050.t1.1 AT1G52980.1 359933

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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