PHATRDRAFT_25549 dead (asp-glu-ala-asp) box polypeptide 56 (DEXDc superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_25549 chr_2 dead (asp-glu-ala-asp) box polypeptide 56 (DEXDc superfamily) 1467954 1469570 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0237
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 74.1964 7.10E-16 274 - 401 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 74.1964 7.10E-16 274 - 401 superfamily 238034
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 181.144 1.43E-53 15 - 224 superfamily 266587
DEXDc DEAD-like helicases superfamily; DEAD-like helicases superfamily. - 126.067 1.13E-33 27 - 229 multi-dom 214692

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262722 Not available 137851 319321 Not available Cre12.g526850.t1.2 AT4G34910.1 506165

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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