PHATRDRAFT_26346 cysteinyl-trna synthetase (PTZ00399)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_26346 chr_4 cysteinyl-trna synthetase (PTZ00399) 1259969 1262083 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0142

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0256
 0.28

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CysRS_core catalytic core domain of cysteinyl tRNA synthetase; Cysteinyl tRNA synthetase (CysRS) catalytic... cl00015 293.716 5.66E-95 35 - 354 specific 173899
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 293.716 5.66E-95 35 - 354 superfamily 260139
Anticodon_Ia_like superfamily Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This domain is... - 42.1995 3.00E-05 408 - 464 superfamily 264512
PTZ00399 cysteinyl-tRNA-synthetase; Provisional - 837.761 0 16 - 646 multi-dom 240402

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
1499 Not available 214409 254568 419956 Cre03.g169850.t1.2 Not available 552257

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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