1499 (CTS1) PTZ00399
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1499 chr_1 (CTS1) PTZ00399 1680928 1683444 - PTZ00399

Synonyms

NCBI ID Ensembl Genomes exon ID
7453402 Thaps1499.1, Thaps1499.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0068

Most Highly Correlated Transcripts

264556

FBPase
0.9262

25144

hypothetical protein
0.9199

12899

AAA
0.9086

24525

hypothetical protein
0.906

16295

FBPase
0.9055

6028

NA
0.8941

40995

phr2
0.8934

261102

PLN00049
0.8932

22318

hypothetical protein
0.8914

24538

hypothetical protein
0.8894

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CysRS_core catalytic core domain of cysteinyl tRNA synthetase; Cysteinyl tRNA synthetase (CysRS) catalytic... cl00015 269.063 3.24E-84 46 - 478 specific 173899
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 269.063 3.24E-84 46 - 478 superfamily 260139
PTZ00399 cysteinyl-tRNA-synthetase; Provisional - 784.603 0 16 - 755 multi-dom 240402

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26346 PHATRDRAFT_26346 208713 254568 68776 Cre03.g169850.t1.2 Not available 552257

KEGG

KEGG description KEGG Pathway
Aminoacyl-tRNA biosynthesis map00970

GO Terms

GO:0004817 GO:0005524 GO:0006423 -

GO:0004817

cysteine-tRNA ligase activity

Details: 
Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006423

cysteinyl-tRNA aminoacylation

Details: 
The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO Category: 
BP

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