PHATRDRAFT_27518 cob21_orysj coatomer subunit beta-1 (beta-coat protein 1) (beta-cop 1) (Coatomer_WDAD)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_27518 chr_9 cob21_orysj coatomer subunit beta-1 (beta-coat protein 1) (beta-cop 1) (Coatomer_WDAD) 8902 12261 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0182

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 223.751 4.36E-66 11 - 289 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 223.751 4.36E-66 11 - 289 superfamily 238121
Coatomer_WDAD Coatomer WD associated region; This region is composed of WD40 repeats. - 499.81 1.04E-167 319 - 783 multi-dom 252340
COG2319 FOG: WD40 repeat [General function prediction only] - 148.313 6.55E-38 26 - 481 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22092 Not available 231452 282837 369371 Cre02.g118500.t1.1 AT1G79990.1 541161

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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