PHATRDRAFT_29887 cg3714-isoform a (PLN02885)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_29887	chr_19	cg3714-isoform a (PLN02885)	366673	368367	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0062

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0073	0.29	0.0000007 9600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NAPRTase_A		Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase...	cl17275	423.523	1.03E-144	20 - 417	specific	238804
PRTase_typeII superfamily		Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important...	-	423.523	1.03E-144	20 - 417	superfamily	266604
PLN02885		nicotinate phosphoribosyltransferase	-	945.63	0	9 - 564	multi-dom	178473

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268929		Not available	227899	256893	Not available	Not available	AT4G36940.1	351223

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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