PHATRDRAFT_30019 rio kinase 2 (COG0478)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_30019 chr_20 rio kinase 2 (COG0478) 206042 207088 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0216

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0075
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is... cl17248 284.805 3.33E-96 79 - 294 specific 240167
RIO superfamily RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger... - 284.805 3.33E-96 79 - 294 superfamily 266585
Rio2_N superfamily Rio2, N-terminal; Members of this family are found in Rio2, and are structurally homologous to the... - 102.619 1.93E-27 8 - 91 superfamily 255230
Rio2_N superfamily Rio2, N-terminal; Members of this family are found in Rio2, and are structurally homologous to the... - 102.619 1.93E-27 8 - 91 superfamily 255230
COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction... - 294.226 2.56E-98 1 - 294 multi-dom 223554

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40089 Not available 150979 247630 52776 Cre03.g159900.t1.1 AT3G51270.1 260476

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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