PHATRDRAFT_30514 ornithine transcarbamylase (PLN02342)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_30514	chr_23	ornithine transcarbamylase (PLN02342)	383678	384883	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0148

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0138	0.26	1200 19000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
OTCace_N superfamily		Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine...	-	178.517	8.10E-55	42 - 185	superfamily	251498
OTCace_N superfamily		Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine...	-	178.517	8.10E-55	42 - 185	superfamily	251498
OTCace superfamily		Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine...	-	166.979	2.85E-50	193 - 345	superfamily	249663
OTCace superfamily		Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine...	-	166.979	2.85E-50	193 - 345	superfamily	249663
PLN02342		ornithine carbamoyltransferase	-	565.956	0	1 - 349	multi-dom	177976

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
997		Not available	268473	213068	236460	Cre12.g489700.t1.2	AT1G75330.1	317226

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments