PHATRDRAFT_32845 ribosomal protein l25 (ctc_TL5)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_32845 chr_2 ribosomal protein l25 (ctc_TL5) 926568 927404 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0243

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L25_TL5_CTC Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain; L25 is a single-domain protein, homologous... cl00787 58.2506 2.19E-11 63 - 165 specific 198379
Ribosomal_L25_TL5_CTC superfamily Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain; L25 is a single-domain protein, homologous... - 58.2506 2.19E-11 63 - 165 superfamily 260622
Ribosomal_TL5_C superfamily Ribosomal protein TL5, C-terminal domain; This family contains the C-terminal domain of ribosomal... - 38.2217 0.000226209 175 - 240 superfamily 258831
ctc_TL5 ribosomal protein L25, Ctc-form; This model models a family of proteins with full-length homology... - 62.7643 2.11E-12 63 - 255 multi-dom 233106

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
11314 Not available 141753 324375 Not available Not available Not available 468557

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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