PHATRDRAFT_33658 rna-binding protein (RRM_SF)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33658 chr_4 rna-binding protein (RRM_SF) 32855 33997 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0207

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_SF RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... cl17169 57.3149 1.13E-10 145 - 223 specific 240668
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 57.3149 1.13E-10 145 - 223 superfamily 266524
COG0724 RNA-binding proteins (RRM domain) [General function prediction only] - 59.5754 2.71E-10 39 - 254 multi-dom 223796

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263845 Not available 218776 147896 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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