PHATRDRAFT_33705 basic-leucine zippertranscription factor
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33705 chr_4 basic-leucine zippertranscription factor 162033 163346 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0091

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0044
 0.37

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger); Zinc finger, C3HC4 type (RING finger). cl17238 43.2153 6.22E-06 26 - 64 specific 258185
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 43.2153 6.22E-06 26 - 64 superfamily 266579
OmpH Outer membrane protein (OmpH-like); This family includes outer membrane proteins such as OmpH among... cl19113 37.9947 0.00103396 134 - 212 specific 252261
ApoLp-III_like superfamily Apolipophorin-III and similar insect proteins; Exchangeable apolipoproteins play vital roles in the... - 37.9947 0.00103396 134 - 212 superfamily 267466

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22771 Not available 263263 286515 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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