PHATRDRAFT_33896 homeobox protein (PHD)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_33896 chr_4 homeobox protein (PHD) 612404 615204 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0192
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PHD PHD zinc finger; The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in... cl17445 44.5102 6.92E-06 136 - 173 specific 214584
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 44.5102 6.92E-06 136 - 173 superfamily 266687
PHD PHD zinc finger; The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in... cl17445 44.5102 6.92E-06 136 - 173 specific 214584
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 44.5102 6.92E-06 136 - 173 superfamily 266687

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24078 Not available 259624 195581 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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