PHATRDRAFT_34050 g-patch domain containing protein (G_patch)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_34050	chr_4	g-patch domain containing protein (G_patch)	978003	978710	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0160	0.36	0.0018 3.3

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
G_patch		glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in the...	cl02611	61.7922	2.74E-13	45 - 90	specific	197727
G-patch superfamily		G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in...	-	61.7922	2.74E-13	45 - 90	superfamily	261371

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21973		Not available	181233	257671	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments