PHATRDRAFT_34060 pentatricopeptiderepeat-containing protein
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_34060 chr_4 pentatricopeptiderepeat-containing protein 997564 999365 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0062

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0186
 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 45.0862 2.98E-06 353 - 411 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 37.3289 0.000968456 306 - 340 superfamily 261658
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 45.0862 2.98E-06 353 - 411 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 37.3289 0.000968456 306 - 340 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 37.3289 0.000968456 306 - 340 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 37.3289 0.000968456 306 - 340 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 37.3289 0.000968456 306 - 340 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 37.3289 0.000968456 306 - 340 superfamily 261658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
1734 Not available 270843 248445 Not available Not available AT1G06710.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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