PHATRDRAFT_34966 tubulin tyrosine ligase-likememberisoform cra_c (TTL superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_34966	chr_6	tubulin tyrosine ligase-likememberisoform cra_c (TTL superfamily)	771990	773926	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0405

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0185	0.34	2100 26000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TTL superfamily		Tubulin-tyrosine ligase family; Tubulins and microtubules are subjected to several post-...	-	88.5294	1.36E-19	339 - 605	superfamily	251749
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	40.4382	0.00013364	155 - 225	multi-dom	257749

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	233943	286649	Not available	Cre06.g300250.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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