PHATRDRAFT_35587 mopfamily transporter: multidrug efflux (MATE_like superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_35587	chr_8	mopfamily transporter: multidrug efflux (MATE_like superfamily)	293266	294951	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0069

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0220	0.29	4300 20000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MATE_like superfamily		Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins...	-	215.503	2.13E-63	119 - 543	superfamily	263758
NorM		Na+-driven multidrug efflux pump [Defense mechanisms]	-	173.565	8.43E-48	121 - 543	multi-dom	223608

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4576		Not available	268811	172243	253030	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments